Topics and Program

This advanced workshop will cover the following sessions:

• MM/PBSA to estimate ligand-binding affinites;
• Deep Learning for protein sequence and structure;
• pKa calculations and constant-pH MD simulations of proteins;
• Using MDanalysis for structural work, before and after simulation.

Access the workshop timetable here!

Lecturers

• Paulo Costa (FCUL)
• Francisco Fernandes (INESC-ID)
• Irina Moreira (UCoimbra)
• Miguel Machuqueiro (FCUL)
• Manuel N. Melo (ITQB NOVA)
• Luana Afonso (UCoimbra)
• Catarina Marques-Pereira (UCoimbra)

Location

The 2023 3D-BioInfo-PT Advanced Workshop will take place at Faculty of Science and Tecnology at University of Coimbra.

Calçada Martim de Freitas
3000-456 Coimbra
Portugal

GPS coordinates

Latitude: 40° 12’ 25.2” (40.207 N)
Longitude: -8° 25’ 19.2” (-8.422 W)

How to get there?

The access to FCTUC-DCV is quick and easy , particularly for those who arrive at Coimbra-A train station. From there, one can walk or use the public transportation available. Taxis or on demand services, such as Uber, are also available.

Bus

Municipal Urban Transport Services of Coimbra (SMTUC):

• from the Bus Terminal: Line 5 or 28
• from the Coimbra-A: Line 103

Taxi

• Praça de Táxis
• Politáxis Coimbra

Accommodation

The organizing committee suggests the following hotels:

Ibis Hotel **
Avenida Emídio Navarro, n°70, Edifício Topázio – 3000-150 Coimbra
Tel: +351 239 852 130
Email: h1672@accor.com

Hotel Dona Inês ***
Rua Abel Dias Urbano, 12, 3000-001 Coimbra
Tel: +351 239 855 800
Email: eventos@donaines.pt

Hotel D. Luís ***
Santa Clara, 3040-091 Coimbra
Tel: +351 239 802 120
Email: reservas@hoteldluis.pt

Hotel Coimbra Aeminium ****
Av. Armando Gonçalves, 20, 3000-059 Coimbra
Tel: +351 239 480 800
Email: reservas.coimbra@melia.com

Vila Galé Coimbra ****
Rua Abel Dias Urbano, 20, 3000-001 Coimbra
Tel: +351 239 240 000
Email: coimbra@vilagale.com; coimbra.reservas@vilagale.com

Hotel Ibn-Arrik ****
Rua Alexandre Herculano, 18-24, 3000-019 Coimbra
Tel: +351 239 822 600 ; +351 969 220 231
Email: geral@ibn-arrik.pt

Tivoli Coimbra Hotel ****
Rua João Machado, nº 4, 3000-226 Coimbra
Tel: +351 239 858 300
Email: coimbra@tivolihotels.com

Local Organization Team

• Irina Moreira
• Beatriz Caniceiro
• Carlos Barreto
• Catarina Marques Pereira
• Luana Afonso
• Nícia Ferreira
• Raquel Gouveia
• Urszula Orzeł

Partners